Package: pcev 2.2.2

Maxime Turgeon

pcev: Principal Component of Explained Variance

Principal component of explained variance (PCEV) is a statistical tool for the analysis of a multivariate response vector. It is a dimension- reduction technique, similar to Principal component analysis (PCA), that seeks to maximize the proportion of variance (in the response vector) being explained by a set of covariates.

Authors:Maxime Turgeon [aut, cre], Aurelie Labbe [aut], Karim Oualkacha [aut], Stepan Grinek [aut]

pcev_2.2.2.tar.gz
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pcev.pdf |pcev.html✨
pcev/json (API)
NEWS

# Install 'pcev' in R:
install.packages('pcev', repos = c('https://greenwoodlab.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/greenwoodlab/pcev/issues

Datasets:
  • index - Methylation values around BLK gene
  • methylation - Methylation values around BLK gene
  • methylation2 - Methylation values around BLK gene
  • pheno - Methylation values around BLK gene
  • pheno2 - Methylation values around BLK gene
  • position - Methylation values around BLK gene
  • position2 - Methylation values around BLK gene

On CRAN:

4.30 score 4 stars 7 scripts 139 downloads 8 exports 2 dependencies

Last updated 6 years agofrom:f54217f17f. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 16 2024
R-4.5-winOKOct 16 2024
R-4.5-linuxOKOct 16 2024
R-4.4-winOKOct 16 2024
R-4.4-macOKOct 16 2024
R-4.3-winOKOct 16 2024
R-4.3-macOKOct 16 2024

Exports:computePCEVestimatePcevPcevBlockPcevClassicalPcevSingularpermutePvalroysPvalwilksPval

Dependencies:corpcorRMTstat

Principal Component of Explained Variance

Rendered frompcev.Rnwusingknitr::knitron Oct 16 2024.

Last update: 2018-02-03
Started: 2015-11-11

Readme and manuals

Help Manual

Help pageTopics
pcev: A package for computing principal components of explained variance.pcev-package
Principal Component of Explained VariancecomputePCEV
Estimation of PCEVestimatePcev estimatePcev.default estimatePcev.PcevBlock estimatePcev.PcevClassical estimatePcev.PcevSingular
Methylation values around BLK geneindex methylation methylation2 pheno pheno2 position position2
Constructor functions for the different pcev objectsPcevBlock PcevClassical PcevObj PcevSingular
Permutation p-valuepermutePval permutePval.default permutePval.PcevBlock permutePval.PcevClassical permutePval.PcevSingular
Roy's largest root exact testroysPval roysPval.default roysPval.PcevBlock roysPval.PcevClassical roysPval.PcevSingular
Wilks' lambda exact testwilksPval wilksPval.default wilksPval.PcevBlock wilksPval.PcevClassical wilksPval.PcevSingular